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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gpatch2, G patch domain containing 2
Sequence ID:NM_026367
Entrez Gene ID:67769
Ensembl ID:ENSMUSG00000039210

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H5|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 187215527 - 187225770

NM_026367 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1166189039389189039554
167883189049381189050097
884945189054662189054723
9461128189057009189057191
11291208189057625189057704
12091276189128208189128275
12771316189140402189140441
13171387189146162189146232
13881476189165365189165453
14774547189172235189175305

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6839419Full LengthBC054810G patch domain containing 2
1434272IncompleteBC038319G patch domain containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080643  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026367 NP_080643 Q7TQC7 G-patch

Related Sequences

 
mRNAGenPeptSwissProt
BC054810 AAH54810 Q7TQC7
AK011727 BAB27803 Q9CSX3
AK017975 BAB31021 Q9D3E7
AK030026 BAC26744 Q7TQC7
AK053781 BAC35520 Q7TQC7
AK083471 BAC38928 Q7TQC7
AK167826 BAE39848 Q3TIJ8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gpatch2 NP_080643 H.sapiens GPATCH2 55105 Gene Info NP_060510 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)