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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tgfa, transforming growth factor alpha
Sequence ID:NM_031199
Entrez Gene ID:21802
Ensembl ID:ENSMUSG00000029999

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 D1|6 35.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 86195226 - 86272476

NM_031199 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12958614524486145538
2963498617942486179477
3504678621315286213269
4686178621992386220072
6187278622137386221482
72842298622194186225442

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130462Full LengthBC132185transforming growth factor alpha
40130488Full LengthBC132211transforming growth factor alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112476  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031199 NP_112476 Q545E4
P48030
EGF

Related Sequences

 
mRNAGenPeptSwissProt
M92420 AAA40481 Q545E4
P48030
U65016 AAB50554 Q545E4
P48030
BC132185 AAI32186 Q545E4
BC132211 AAI32212 Q545E4
AK010785 BAB27181 Q545E4
P48030
AK162680 BAE37019 Q545E4
P48030
AK166321 BAE38704 Q545E4
P48030

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tgfa NP_112476 R.norvegicus Tgfa 24827   NP_036803 98
H.sapiens TGFA 7039 Gene Info NP_001093161 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)