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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pax3, paired box gene 3
Sequence ID:NM_001159520
NM_008781
Entrez Gene ID:18505
Ensembl ID:ENSMUSG00000004872

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C4|1 44.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 78102946 - 78196839

 Exon Info From UCSC:
NM_001159520
NM_008781

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6518115Full LengthBC048699paired box gene 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032807  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159520 NP_001152992    
NM_008781 NP_032807 P24610 Homeobox
PAX

Related Sequences

 
mRNAGenPeptSwissProt
S66429 AAB20359 P24610
S66433 AAB20360 P24610
BC048699 AAH48699 Q8BRF1
AK012493 BAB28278 Q9CZK7
AK014337 BAB29280 P24610
AK044985 BAC32170 Q8BRF1
AK045018 BAC32185 P24610
AK147919 BAE28229 Q3UGH9
AK148354 BAE28501 P24610
AK157760 BAE34184 Q3TZM4
X59358 CAA42008 P24610

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pax3 NP_001152992 R.norvegicus Pax3 114502   NP_446162 100
H.sapiens PAX3 5077 Gene Info NP_852124 99
D.melanogaster prd 34629   NP_723721 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta