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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tpd52l2, Tumor protein D52-like 2
Sequence ID:NM_025482
Entrez Gene ID:66314
Ensembl ID:ENSMUSG00000000827

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H4|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 181497200 - 181515898

NM_025482 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
180181231957181232036
81226181234549181234694
227375181236609181236757
376435181237580181237639
436537181242870181242971
538579181246278181246319
580628181247743181247791
6292306181249784181251461

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2647702Full LengthBC006886tumor protein D52-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079758  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025482 NP_079758 Q9CYZ2 TPD52

Related Sequences

 
mRNAGenPeptSwissProt
BC006886 AAH06886 Q9CYZ2
AK013085 BAB28639 Q9CZ22
AK013188 BAB28701 Q9CYZ2
AK051268 BAC34583 Q8BKP1
AK147885 BAE28203 Q3TAI4
AK155987 BAE33536 Q3TUJ9
AK159925 BAE35487 Q9CYZ2
AK160727 BAE35972 Q3TUJ9
AK161092 BAE36191 Q3TUJ9
AK171825 BAE42684 Q3TAI4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tpd52l2 NP_079758 R.norvegicus Tpd52l2 296480   NP_942039 98
H.sapiens TPD52L2 7165 Gene Info NP_955392 91
A.gambiae AgaP_AGAP004868 1275088   XP_314318 40
D.melanogaster CG5174 37117   NP_725793 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)