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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nfil3, nuclear factor, interleukin 3, regulated
Sequence ID:NM_017373
Entrez Gene ID:18030
Ensembl ID:ENSMUSG00000056749

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 B1|13 32.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 52967211 - 52981039

NM_017373 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2818405306257753064389
184120195307622953076407

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5253195Full LengthBC031377nuclear factor, interleukin 3, regulated
30479201Full LengthBC100384nuclear factor, interleukin 3, regulated

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059069  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017373 NP_059069 O08750 Vert_IL3-reg_TF
bZIP_2

Related Sequences

 
mRNAGenPeptSwissProt
U89411 AAC36518 O89065
BC031377 AAH31377 O08750
BC100384 AAI00385 O08750
AY061760 AAL29942 O08750
AK145451 BAE26446 O08750

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nfil3 NP_059069 R.norvegicus Nfil3 114519   NP_446179 96
H.sapiens NFIL3 4783 Gene Info NP_005375 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)