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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ifih1, Interferon induced with helicase C domain 1
Sequence ID:NM_027835
NM_001164477
Entrez Gene ID:71586
Ensembl ID:ENSMUSG00000026896

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 C3

Chromosomal Position (from UCSC)

Chromosomal Position:2: 62597449 - 62646160

 Exon Info From UCSC:
NM_027835
NM_001164477

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3597815Full LengthBC080200interferon induced with helicase C domain 1
3495361IncompleteBC004031interferon induced with helicase C domain 1
3990931IncompleteBC019605interferon induced with helicase C domain 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082111  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001164477 NP_001157949      
NM_027835 NP_082111 Q8R5F7 EC 3.6.4.13 DEAD
Helicase_C
CARD
ResIII

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC004031 AAH04031 Q8R5F7 EC 3.6.4.13
BC019605 AAH19605 Q8R5F7 EC 3.6.4.13
BC025508 AAH25508 Q8R5F7 EC 3.6.4.13
BC080200 AAH80200 Q8R5F7 EC 3.6.4.13
AY075132 AAL77205 Q8R5F7 EC 3.6.4.13
AF374384 AAM21359 Q8R5F7 EC 3.6.4.13
EF113547 ABO33313 D2CGM4  
EF113548 ABO33314 D2CGM5  
EU084750 ABW76702 D2CGM5  
AK018602 BAB31303 Q8R5F7 EC 3.6.4.13
AK037057 BAC29687 Q8R5F7 EC 3.6.4.13
AK040519 BAC30614 Q8R5F7 EC 3.6.4.13
AK149802 BAE29095 Q3UE16  
AK153018 BAE31652 Q8R5F7 EC 3.6.4.13
AK153344 BAE31920 Q3U605  
AK156450 BAE33716 Q3U0Y5  
AK168646 BAE40503 Q3TGP5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifih1 NP_082111 R.norvegicus Ifih1 499801   NP_001102669 94
H.sapiens IFIH1 64135 Gene Info NP_071451 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)