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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ascl1, achaete-scute complex homolog 1 (Drosophila)
Sequence ID:NM_008553
Entrez Gene ID:17172
Ensembl ID:ENSMUSG00000020052

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10

Chromosomal Position (from UCSC)

Chromosomal Position:2: 152811998 - 152813480

NM_008553 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19518695378586954735
95222598695509786956404

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6415061Full LengthBC055748achaete-scute complex homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032579  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008553 NP_032579 Q02067 HLH

Related Sequences

 
mRNAGenPeptSwissProt
M95603 AAA37780 Q53WV9
Q02067
BC055748 AAH55748 Q02067
AK143210 BAE25307 Q02067

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ascl1 NP_032579 R.norvegicus Ascl1 64186   NP_071779 99
H.sapiens ASCL1 429 Gene Info NP_004307 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)