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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cga, glycoprotein hormones, alpha subunit
Sequence ID:NM_009889
Entrez Gene ID:12640
Ensembl ID:ENSMUSG00000028298

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 A5|4 10.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 34903995 - 34907367

NM_009889 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1833484102734841109
841973485124134851354
1983823485232634852510
3836913485431434854622

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30251641Full LengthBC087926glycoprotein hormones, alpha subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034019  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009889 NP_034019 P01216 Hormone_6

Related Sequences

 
mRNAGenPeptSwissProt
J00643 AAA96700 P01216
AF307151 AAG30279 P01216
BC087926 AAH87926 P01216

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cga NP_034019 R.norvegicus Cga 116700   NP_446370 98
H.sapiens CGA 1081 Gene Info NP_000726 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)