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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cd207, CD207 antigen
Sequence ID:NM_144943
Entrez Gene ID:246278
Ensembl ID:ENSMUSG00000034783

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 D1-D2

Chromosomal Position (from UCSC)

Chromosomal Position:6: 83671214 - 83677857

NM_144943 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16278362120083621826
6287468362275083622868
7478988362423983624390
89912738362556683625940
127413908362750283627618
139115308362771183627850

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015155BC146457CD207 antigen

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_659192  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_144943 NP_659192 Q8VBX4 Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC146457 AAI46458  
AY026050 AAK01952 Q8VBX4
AY078415 AAL83701 Q8VBX4
AK142731 BAE25177 Q8VBX4
AJ302711 CAC82936 Q8VBX4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cd207 NP_659192 R.norvegicus Cd207 502852   XP_578352 85
H.sapiens CD207 50489 Gene Info NP_056532 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)