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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc33a1, solute carrier family 33 (acetyl-CoA transporter), member 1
Sequence ID:NM_015728
Entrez Gene ID:11416
Ensembl ID:ENSMUSG00000027822

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3|3 E1-E3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 63943248 - 63964190

NM_015728 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110816374625763747337
108212976374848763748702
129814156375149063751607
141616006375199363752177
160117916375773563757925
179231096376733763768654

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3154886Full LengthBC005616solute carrier family 33 (acetyl-CoA transporter), member 1
5042025Full LengthBC063104solute carrier family 33 (acetyl-CoA transporter), member 1
6492236Full LengthBC054395solute carrier family 33 (acetyl-CoA transporter), member 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015728 NP_056543 Q99J27  

Related Sequences

 
mRNAGenPeptSwissProt
BC005616 AAH05616 Q99J27
BC054395 AAH54395 Q99J27
BC063104 AAH63104 Q99J27
AB016795 BAA76933 Q99J27
AK135092 BAE22418 Q3UXZ5
AK136323 BAE22932 Q3UWI3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc33a1 NP_056543 R.norvegicus Slc33a1 64018   NP_071588 97
H.sapiens SLC33A1 9197 Gene Info NP_001177921 94
A.gambiae AgaP_AGAP006943 1270141   XP_308813 54
C.elegans T26C5.3 259455   NP_001022370 54
D.melanogaster CG9706 39876   NP_730198 54
N.crassa NCU09101 3881042   XP_964918 41
S.pombe SPBC21B10.09 2540573   NP_595678 36
S.cerevisiae YBR220C 852521   NP_009779 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)