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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Otx2, orthodenticle homolog 2 (Drosophila)
Sequence ID:NM_144841
Entrez Gene ID:18424
Ensembl ID:ENSMUSG00000021848

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 C1|14 19.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:14: 48658183 - 48662872

NM_144841 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1411564927785849279000
115713084928097349281124
130917374928211849282546

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4527414Full LengthBC017609orthodenticle homolog 2 (Drosophila)
5359966Full LengthBC027104orthodenticle homolog 2 (Drosophila)
5362013Full LengthBC029667orthodenticle homolog 2 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_659090  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_144841 NP_659090 Q8VD35 Homeobox
TF_Otx

Related Sequences

 
mRNAGenPeptSwissProt
BC017609 AAH17609 Q8VD35
BC027104 AAH27104 Q8R0B5
BC029667 AAH29667 Q8R0B5
AK053741 BAC35500 Q8VD35
AK081535 BAC38249 Q8VD35
AK087527 BAC39913 Q8VD35
X68884 CAA48755 P80206

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Otx2 NP_659090 H.sapiens OTX2 5015 Gene Info NP_068374 99
R.norvegicus Otx2 305858   NP_001094036 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)