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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Scfd2, Sec1 family domain containing 2
Sequence ID:NM_178672
NM_001114660
Entrez Gene ID:212986
Ensembl ID:ENSMUSG00000062110

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 C3.3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 74456259 - 74531736

 Exon Info From UCSC:
NM_178672
NM_001114660

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3256631Full LengthBC042528Sec1 family domain containing 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001114660 NP_001108132 Q8BTY8  
NM_178672 NP_848787 Q3TR67  

Related Sequences

 
mRNAGenPeptSwissProt
BC042528 AAH42528 Q3TR67
Q8BTY8
AK036637 BAC29514 Q8BTY8
AK044408 BAC31906 Q8BTY8
AK047026 BAC32943 Q8BTY8
AK047738 BAC33143 Q8BTY8
AK050673 BAC34373 Q8BTY8
AK054548 BAC35820 Q3TR67
Q8BTY8
AK088353 BAC40298 Q8BTY8
AK089011 BAC40699 Q8BTY8
AK135666 BAE22606 Q3UXF7
AK140246 BAE24296 Q8BTY8
AK143615 BAE25466 Q3UPD0
AK163028 BAE37163 Q3TR67

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Scfd2 NP_001108132 R.norvegicus Scfd2 498353   NP_001017499 94
H.sapiens SCFD2 152579 Gene Info NP_689753 83
A.thaliana AT2G42700 818870   NP_001189734 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)