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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccr4, chemokine (C-C motif) receptor 4
Sequence ID:NM_009916
Entrez Gene ID:12773
Ensembl ID:ENSMUSG00000047898

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F3|9 61.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 114491720 - 114496544

NM_009916 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12740114399433114402172
27412787114405615114405661

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8733920Full LengthBC119171chemokine (C-C motif) receptor 4
40126360Full LengthBC117041chemokine (C-C motif) receptor 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034046  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009916 NP_034046 P51680 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
U15208 AAA92582 P51680
BC117041 AAI17042 P51680
BC119171 AAI19172 P51680
X90862 CAA62372 P51680

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccr4 NP_034046 R.norvegicus Ccr4 171054   NP_598216 95
H.sapiens CCR4 1233 Gene Info NP_005499 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)