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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Dhcr24, 24-dehydrocholesterol reductase
Sequence ID:NM_053272
Entrez Gene ID:74754
Ensembl ID:ENSMUSG00000034926

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C7|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 106588078 - 106589106

NM_053272 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1360106233642106234001
361516106237005106237160
517622106244016106244121
623741106244829106244947
7421005106246332106246595
10061149106250794106250937
11501347106258394106258591
13481526106258949106259127
15274028106259216106261717

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5054108Full LengthBC01979724-dehydrocholesterol reductase
4211983IncompleteBC05592324-dehydrocholesterol reductase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444502  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_053272 NP_444502 Q8VCH6 EC 1.3.1.72 FAD_binding_4

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC019797 AAH19797 Q8VCH6 EC 1.3.1.72
AY039762 AAK72106 Q8VCH6 EC 1.3.1.72
AK017937 BAB31012 Q8VCH6 EC 1.3.1.72
AK129036 BAC97846 Q8VCH6 EC 1.3.1.72

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Dhcr24 NP_444502 R.norvegicus Dhcr24 298298   NP_001073617 99
H.sapiens DHCR24 1718 Gene Info NP_055577 97
C.elegans F52H2.6 186134   NP_508463 51
A.thaliana DWF1 821519   NP_001189937 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)