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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rint1, RAD50 interactor 1
Sequence ID:NM_177323
Entrez Gene ID:72772
Ensembl ID:ENSMUSG00000028999

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 A3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 23787710 - 23788496

 Exon Info From UCSC:
NM_177323

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6401664Full LengthBC065059RAD50 interactor 1
9053821Full LengthBC145267RAD50 interactor 1
9087656Full LengthBC150745RAD50 interactor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_796297  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177323 NP_796297 Q8BZ36 RINT1_TIP1

Related Sequences

 
mRNAGenPeptSwissProt
BC065059 AAH65059 Q8BZ36
BC145267 AAI45268 B2RWX4
BC150745 AAI50746 B2RWX4
AK028707 BAC26077 Q8BZ36
AK036805 BAC29582 Q8BZ36
AK135334 BAE22492 Q8BZ36

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rint1 NP_796297 R.norvegicus RGD1560433 296750   XP_002729316 93
H.sapiens RINT1 60561 Gene Info NP_068749 88
D.melanogaster CG8605 38807   NP_648102 33
A.gambiae AgaP_AGAP007482 1269742   XP_308391 32
N.crassa NCU02270 3876100   XP_959914 26
A.thaliana MAG2 823924   NP_190354 22

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)