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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. C1rl, complement component 1, r subcomponent-like
Sequence ID:NM_181344
Entrez Gene ID:232371
Ensembl ID:ENSMUSG00000038527

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F2|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 124493814 - 124509147

NM_181344 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1118124443130124443247
119347124443832124444060
348537124455248124455437
538639124456909124457010
640714124457107124457181
7153010124458365124460660

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30627947Full LengthBC070472complement component 1, r subcomponent-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_851989  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_181344 NP_851989 Q3UZ09 Trypsin
CUB

Related Sequences

 
mRNAGenPeptSwissProt
BC070472 AAH70472 Q3UZ09
AF456428 AAP41417 Q3UZ09
AK133495 BAE21686 Q3UZ09
AK134207 BAE22052 Q3UZ09

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus C1rl NP_851989 R.norvegicus C1rl 408246   NP_001002804 90
H.sapiens C1RL 51279 Gene Info NP_057630 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)