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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pex2, peroxisomal biogenesis factor 2
Sequence ID:NM_001163304
NM_001163301
NM_001163302
NM_001163305
NM_001163306
NM_001267714
NM_001267715
NM_008994
Entrez Gene ID:19302
Ensembl ID:ENSMUSG00000040374

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 A1|3 1.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 5560499 - 5576239

 Exon Info From UCSC:
NM_001163304
NM_001163301
NM_001163302
NM_001163305
NM_001163306
NM_008994

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3964491Full LengthBC012404peroxisomal membrane protein 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033020  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163301 NP_001156773    
NM_001163302 NP_001156774    
NM_001163305 NP_001156777    
NM_001163306 NP_001156778    
NM_001267714 NP_001254643    
NM_001267715 NP_001254644    
NM_008994 NP_033020 Q91YZ5 zf-C3HC4
Pex2_Pex12

Related Sequences

 
mRNAGenPeptSwissProt
AF031128 AAB91465 Q91YZ5
P55098
BC012404 AAH12404 Q91YZ5
AK146530 BAE27238 Q3UJB7
AK151121 BAE30130 Q91YZ5
AK152331 BAE31130 Q91YZ5
XM_895806 XP_900899  
XM_920096 XP_925189  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pxmp3 NP_001156773 R.norvegicus Pex2 29534   NP_058930 93
H.sapiens PEX2 5828 Gene Info NP_000309 88
A.gambiae AgaP_AGAP010836 1271126   XP_309872 34
N.crassa NCU02070 3880759   XP_964597 33
D.melanogaster pex2 38941   NP_648210 32
A.thaliana TED3 844320   NP_565222 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)