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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Snrpb2, U2 small nuclear ribonucleoprotein B
Sequence ID:NM_021335
Entrez Gene ID:20639
Ensembl ID:ENSMUSG00000008333

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 G1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 143063070 - 143068327

NM_021335 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
130142888804142888833
31119142890277142890365
120292142890911142891083
293433142893996142894136
434484142895109142895159
485573142896623142896711
5741230142897131142897787

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3483683Full LengthBC026794U2 small nuclear ribonucleoprotein B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067310  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021335 NP_067310 Q9CQI7 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC026794 AAH26794 Q9CQI7
AK005107 BAB23823 Q9CQI7
AK011274 BAB27510 Q9CQI7
AK012944 BAB28565 Q9CQI7
AK013871 BAB29026 Q9CQI7
X63019 CAA44751 Q62378
X63020 CAA44752 Q62379

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Snrpb2 NP_067310 R.norvegicus Snrpb2 362223   NP_001102062 99
H.sapiens SNRPB2 6629 Gene Info NP_003083 96
A.thaliana AT1G06960 837206   NP_850936 56
A.thaliana U2B'' 817576   NP_180585 53
C.elegans rnp-3 177182   NP_500505 51
S.pombe usp102 2540865   NP_596424 42
N.crassa NCU08034 3878811   XP_962704 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)