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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sync, syncoilin
Sequence ID:NM_023485
Entrez Gene ID:68828
Ensembl ID:ENSMUSG00000001333

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.2|4 60.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 129287684 - 129308386

NM_023485 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1168128964864128965031
1691318128970470128971619
13191443128983585128983709
14441520128983871128983947
15212038128985285128985802

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40046886Full LengthBC106855syncoilin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023485 NP_075974 Q9EPM5  

Related Sequences

 
mRNAGenPeptSwissProt
BC106855 AAI06856 Q9EPM5
FJ752162 ACN22024 C0LQ87
FJ752163 ACN22025 C0LQ88
FJ752164 ACN22026 C0LQ89
AK004279 BAB23246 Q9EPM5
AK081983 BAC38387 Q9EPM5
AK160756 BAE35992 Q9EPM5
AK166916 BAE39114 Q9EPM5
AJ251641 CAC17787 Q9EPM5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sync NP_075974 R.norvegicus Sync 362606   NP_001102153 91
H.sapiens SYNC 81493 Gene Info NP_110413 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)