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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ehd4, EH-domain containing 4
Sequence ID:NM_133838
Entrez Gene ID:98878
Ensembl ID:ENSMUSG00000027293

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E5|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 120091150 - 120154475

NM_133838 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12198119915222119917419
21992363119922698119922862
23642776119927755119928167
27772874119953327119953424
28753051119962634119962810
30523387119979975119980310

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3485836Full LengthBC012272EH-domain containing 4
3493227Full LengthBC007480EH-domain containing 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598599  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133838 NP_598599 Q9EQP2
Q3TM70
Dynamin_N

Related Sequences

 
mRNAGenPeptSwissProt
AF173639 AAG45672 Q9EQP2
Q3TM70
BC007480 AAH07480 Q9EQP2
Q3TM70
BC012272 AAH12272 Q91VL7
AK147186 BAE27747 Q9EQP2
Q3TM70
AK159597 BAE35217 Q3TWP9
AK163835 BAE37511 Q3TQ74
AK166101 BAE38572 Q9EQP2
Q3TM70
AK169343 BAE41095 Q9EQP2
Q3TM70
AB239915 BAE93881 Q1MWP9
AB239916 BAE93882 Q1MWP8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ehd4 NP_598599 R.norvegicus Ehd4 192204   NP_647540 99
H.sapiens EHD4 30844 Gene Info NP_644670 97
P.falciparum PfPast-1 814359   XP_001351117 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)