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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Sftpd, surfactant associated protein D
Sequence ID:NM_009160
Entrez Gene ID:20390
Ensembl ID:ENSMUSG00000021795

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 B|14 14.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:14: 41172319 - 41185149

NM_009160 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
25014198550141986000
5025854198776541987848
5867024198891641989032
7038194198978141989897
8209364199022441990340
93710534199058141990697
105412524199622541996423
125313264199841341998486

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3601620Full LengthBC003705surfactant associated protein D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033186  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009160 NP_033186 P50404 Lectin_C
Collagen

Related Sequences

 
mRNAGenPeptSwissProt
L40156 AAA92021 P50404
BC003705 AAH03705 P50404

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sftpd NP_033186 R.norvegicus Sftpd 25350   NP_037010 92
H.sapiens SFTPD 6441 Gene Info NP_003010 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)