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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cxcl11, chemokine (C-X-C motif) ligand 11
Sequence ID:NM_019494
NR_038116
Entrez Gene ID:56066

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5|5 E3

Chromosomal Position (from UCSC)

Chromosomal Position:5: 92360183 - 92363277

NM_019494 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1212739278857092789831
127413469279006892790140
134714739279023392790359
147414959279218092792201
149715979279220292792302

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5035983Full LengthBC025903chemokine (C-X-C motif) ligand 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062367  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019494 NP_062367 Q9JHH5 IL8

Related Sequences

 
mRNAGenPeptSwissProt
AF179872 AAF77095 Q9JHH5
AF136449 AAF79022 Q9JHH5
AF178672 AAF79048 Q9JHH5
BC025903 AAH25903 Q8R392

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cxcl11 NP_062367 R.norvegicus Cxcl11 305236   NP_891997 77
H.sapiens CXCL11 6373 Gene Info NP_005400 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)