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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Clrn1, clarin 1
Sequence ID:NM_153384
NM_153385
NM_153386
Entrez Gene ID:229320
Ensembl ID:ENSMUSG00000043850

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 D|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 58846013 - 58885212

 Exon Info From UCSC:
NM_153384
NM_153385
NM_153386

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053753Full LengthBC145202clarin 1
40130531Full LengthBC132254clarin 1
40130533Full LengthBC132256clarin 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153384 NP_700433    
NM_153385 NP_700434 Q8K445  
NM_153386 NP_700435 Q8K444  

Related Sequences

 
mRNAGenPeptSwissProt
BC132254 AAI32255 Q8K444
BC132256 AAI32257 Q8K444
BC145202 AAI45203 B7ZNE8
AF495718 AAM88775 Q8K445
AF495719 AAM88776 Q8K445
AF495720 AAM88777 Q8K444
AK037267 BAC29781 Q8BYX9
AK041623 BAC31009 Q8K444
AK042523 BAC31282 Q8K444

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clrn1 NP_700433 R.norvegicus Clrn1 261738   NP_695211 94
H.sapiens CLRN1 7401 Gene Info NP_001182723 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)