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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hoxa2, homeobox A2
Sequence ID:NM_010451
Entrez Gene ID:15399
Ensembl ID:ENSMUSG00000014704

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B3|6 26.29 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 52162887 - 52164646

NM_010451 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1211265211250952113623
112716925211426452114829

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40126424Full LengthBC117105homeo box A2
40126426Full LengthBC117107homeo box A2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034581  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010451 NP_034581 P31245 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
M95599 AAA37827 P31245
M93292 AAA37836 P31245
BC117105 AAI17106 P31245
BC117107 AAI17108 P31245
AK134501 BAE22163 Q3UYP9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hoxa2 NP_034581 R.norvegicus Hoxa2 24452   NP_036713 99
H.sapiens HOXA2 3199 Gene Info NP_006726 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)