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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mtdh, Metadherin
Sequence ID:NM_026002
Entrez Gene ID:67154
Ensembl ID:ENSMUSG00000022255

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 B3.3|15 53.5

Chromosomal Position (from UCSC)

Chromosomal Position:15: 34082780 - 34141379

 Exon Info From UCSC:
NM_026002

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861880Full LengthBC138858metadherin
8861881Full LengthBC138859metadherin
4216031IncompleteBC023115metadherin
5035593IncompleteBC036994metadherin
6706938IncompleteBC049700Metadherin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026002 NP_080278 Q80WJ7  

Related Sequences

 
mRNAGenPeptSwissProt
BC023115 AAH23115 Q80WJ7
BC036994 AAH36994 Q80WJ7
BC138858 AAI38859 Q80WJ7
BC138859 AAI38860 Q80WJ7
AF501309 AAP30790 Q80WJ7
AY553638 AAS68097 Q80WJ7
AK011808 BAB27854 Q80WJ7
AK029915 BAC26673 Q80WJ7
AK035302 BAC29022 Q80WJ7
AK151269 BAE30256 Q80WJ7
AK151810 BAE30709 Q80WJ7
AK171976 BAE42756 Q3TAB3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mtdh NP_080278 R.norvegicus Mtdh 170910   NP_596889 96
H.sapiens MTDH 92140 Gene Info NP_848927 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)