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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Npsr1, neuropeptide S receptor 1
Sequence ID:NM_175678
Entrez Gene ID:319239
Ensembl ID:ENSMUSG00000043659

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A3-A4|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 24098017 - 24316398

NM_175678 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1492390246123902509
502372390260223902789
2383702393917723939309
3714742405904324059146
4755682409120024091293
5697702409424324094444
7718472410484224104918
8489342411445224114538
93511152411761624117796
111637912411816624120841

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100016527Full LengthBC153168neuropeptide S receptor 1
100014716BC141449neuropeptide S receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_783609  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175678 NP_783609 Q8BZP8 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC141449 AAI41450  
BC153168 AAI53169  
AY255574 AAO85086 Q8BZP8
AY299387 AAQ75583 Q8BZP8
A1KXK3
AK033957 BAC28526 Q8BZP8
AK041451 BAC30949 Q8BZP8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Npsr1 NP_783609 R.norvegicus Npsr1 300458   NP_001100278 96
H.sapiens NPSR1 387129 Gene Info NP_997055 89
A.gambiae GPRVPR1 1281161   XP_321100 47
D.melanogaster CcapR 2768688   NP_996297 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)