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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Harbi1, harbinger transposase derived 1
Sequence ID:NM_178724
Entrez Gene ID:241547
Ensembl ID:ENSMUSG00000027243

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 91712194 - 91719287

NM_178724 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13029155110691551407
30310889155223691553021
108923019156051091561722

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5716740Full LengthBC094315harbinger transposase derived 1
5126087IncompleteBC049253RIKEN cDNA D230010M03 gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178724 NP_848839 Q8BR93  

Related Sequences

 
mRNAGenPeptSwissProt
BC094315 AAH94315 Q8BR93
AK041747 BAC31051 Q8BR93
AK045343 BAC32318 Q8BR93
AK080671 BAC37974 Q8BR93
AK084226 BAC39145 Q8BR93
AK147045 BAE27631 Q8BR93

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Harbi1 NP_848839 R.norvegicus Harbi1 690164   NP_001107265 95
H.sapiens HARBI1 283254 Gene Info NP_776172 90
A.thaliana AT3G55350 824701   NP_191095 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)