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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sfpi1, SFFV proviral integration 1
Sequence ID:NM_011355
Entrez Gene ID:20375
Ensembl ID:ENSMUSG00000002111

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E3|2 47.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 91096780 - 91115747

NM_011355 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11979093695390937149
1982949093958690939682
2954859095341190953601
4866519095440190954566
65213339095523190955912

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3600260Full LengthBC003815SFFV proviral integration 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035485  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011355 NP_035485 Q3U5L4
P17433
Ets

Related Sequences

 
mRNAGenPeptSwissProt
M32370 AAA40024 Q3U5L4
P17433
M38252 AAA40110 Q3U5L4
P17433
L03215 AAB59699 P17433
BC003815 AAH03815 Q3U5L4
P17433
AK142246 BAE24993 Q3U5L4
P17433
AK153524 BAE32064 Q3U5L4
P17433
AK154945 BAE32942 Q3U5L4
P17433
AK155085 BAE33036 Q3U5L4
P17433
X17463 CAA35502 P17433

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sfpi1 NP_035485 R.norvegicus Spi1 366126   NP_001005892 93
H.sapiens SPI1 6688 Gene Info NP_001074016 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)