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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cst7, cystatin F (leukocystatin)
Sequence ID:NM_009977
Entrez Gene ID:13011
Ensembl ID:ENSMUSG00000068129

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 G1-G3

Chromosomal Position (from UCSC)

Chromosomal Position:2: 150570433 - 150578942

NM_009977 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1171150396150150396320
172344150401439150401611
345461150403391150403507
462984150404155150404677

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40126366Full LengthBC117047cystatin F (leukocystatin)
40126368Full LengthBC117049cystatin F (leukocystatin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034107  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009977 NP_034107 Q9QWL5
O89098
Cystatin

Related Sequences

 
mRNAGenPeptSwissProt
AF031825 AAC40139 O89098
BC117047 AAI17048 Q9QWL5
BC117049 AAI17050 Q9QWL5
AB015224 BAA34940 Q9QWL5
AK004420 BAB23298 Q9QWL5
AK170583 BAE41893 Q3TCR2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cst7 NP_034107 R.norvegicus Cst7 296257   NP_001099993 90
H.sapiens CST7 8530 Gene Info NP_003641 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)