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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Foxc1, forkhead box C1
Sequence ID:NM_008592
Entrez Gene ID:17300
Ensembl ID:ENSMUSG00000050295

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A3.2|13 20.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 31806690 - 31810289

NM_008592 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
139903189851431902503

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5720391Full LengthBC052011forkhead box C1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032618  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008592 NP_032618 Q61572 Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
L10406 AAA03159 Q61572
AF045017 AAC24209 Q61572
BC052011 AAH52011 Q61572
AK144420 BAE25882 Q61572

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Foxc1 NP_032618 R.norvegicus Foxc1 364706   XP_002728515 99
H.sapiens FOXC1 2296 Gene Info NP_001444 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)