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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Blm, Bloom syndrome, RecQ helicase-like
Sequence ID:NM_001042527
NM_007550
Entrez Gene ID:12144
Ensembl ID:ENSMUSG00000030528

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 D3|7 40.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 80455091 - 80534988

 Exon Info From UCSC:
NM_001042527
NM_007550

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063374Full LengthBC157095Bloom syndrome homolog (human)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031576  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001042527 NP_001035992 O88700 EC 3.6.4.12  
NM_007550 NP_031576     DEAD
Helicase_C
HRDC
BDHCT

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC157095 AAI57096 O88700 EC 3.6.4.12
AB008674 BAA32001 O88700 EC 3.6.4.12
Z98263 CAB10933 O88700 EC 3.6.4.12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Blm NP_031576 R.norvegicus Blm 308755   NP_001100996 88
H.sapiens BLM 641 Gene Info NP_000048 78
A.thaliana RECQI1 819743   NP_187225 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)