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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ccl22, chemokine (C-C motif) ligand 22
Sequence ID:NM_009137
Entrez Gene ID:20299
Ensembl ID:ENSMUSG00000031779

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C5|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 94745589 - 94751699

NM_009137 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11039726958397269685
1042279727080197270924
22818119727370497275287

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4192393Full LengthBC012658chemokine (C-C motif) ligand 22

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033163  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009137 NP_033163 O88430
Q546S6
IL8

Related Sequences

 
mRNAGenPeptSwissProt
AF052505 AAC40200 O88430
Q546S6
AF076596 AAD50547 O88430
Q546S6
AF163476 AAD55763 Q9QZU2
BC012658 AAH12658 O88430
Q546S6
AK155083 BAE33035 O88430
Q546S6
AK155764 BAE33426 O88430
Q546S6
AK156627 BAE33782 O88430
Q546S6
AK170080 BAE41551 O88430
Q546S6
AJ238238 CAB40894 O88430
Q546S6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccl22 NP_033163 R.norvegicus Ccl22 117551   NP_476551 89
H.sapiens CCL22 6367 Gene Info NP_002981 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)