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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lhx6, LIM homeobox protein 6
Sequence ID:NM_001083125
NM_001083126
NM_001083127
NM_008500
Entrez Gene ID:16874
Ensembl ID:ENSMUSG00000026890

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 B|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 36081971 - 36104060

 Exon Info From UCSC:
NM_001083125
NM_001083126
NM_001083127
NM_008500

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6816328Full LengthBC065077LIM homeobox protein 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032526  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001083125 NP_001076594    
NM_001083126 NP_001076595 Q9R1R0  
NM_001083127 NP_001076596    
NM_008500 NP_032526   Homeobox
LIM

Related Sequences

 
mRNAGenPeptSwissProt
BC065077 AAH65077 Q9R1R0
AB031039 BAA83420 Q9R1R0
AB031040 BAA83421 Q9R1R0
AK090339 BAC41175 Q8C1U0
AK149585 BAE28976 Q3UED5
AJ000337 CAA04011 Q9R1R0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lhx6 NP_032526 R.norvegicus Lhx6 311901   NP_001101307 99
H.sapiens LHX6 26468 Gene Info NP_055183 98
A.gambiae AgaP_AGAP006537 4576611   XP_001237835 53
A.gambiae AgaP_AGAP006536 1277135   XP_316574 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)