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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cxcr3, chemokine (C-X-C motif) receptor 3
Sequence ID:NM_009910
Entrez Gene ID:12766
Ensembl ID:ENSMUSG00000050232

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X D|X 41.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 101731535 - 101734147

NM_009910 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
115079892687498928380
150816089892938598929485

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30749408Full LengthBC096626chemokine (C-X-C motif) receptor 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034040  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009910 NP_034040 O88410 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
AF045146 AAC40163 O88410
BC096626 AAH96626 O88410
AB003174 BAA34045 O88410

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cxcr3 NP_034040 R.norvegicus Cxcr3 84475   NP_445867 96
H.sapiens CXCR3 2833 Gene Info NP_001136269 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta