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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chst3, carbohydrate (chondroitin 6/keratan) sulfotransferase 3
Sequence ID:NM_016803
Entrez Gene ID:53374
Ensembl ID:ENSMUSG00000057337

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B4|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 60185604 - 60194239

NM_016803 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2053735964427759649630
537456195965082059651065
562057725965684059656992
577361295968165159682007

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6493234Full LengthBC055055carbohydrate (chondroitin 6/keratan) sulfotransferase 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058083  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016803 NP_058083 O88199 EC 2.8.2.17 Sulfotransfer_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC055055 AAH55055 O88199 EC 2.8.2.17
AB008937 BAA29054 O88199 EC 2.8.2.17
AB008938 BAA29055 O88199 EC 2.8.2.17

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chst3 NP_058083 R.norvegicus Chst3 84468   NP_445860 94
H.sapiens CHST3 9469 Gene Info NP_004264 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)