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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lfng, LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Sequence ID:NM_008494
Entrez Gene ID:16848
Ensembl ID:ENSMUSG00000029570

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5 80.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 140607361 - 140614486

NM_008494 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1504141083294141083797
505553141087803141087851
554653141088244141088343
654807141088456141088609
808893141088713141088798
8941059141089109141089274
10601145141090144141090229
11462284141090360141091498

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861620Full LengthBC138600LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
8861621Full LengthBC138601LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
40104178Full LengthBC115680LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032520  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008494 NP_032520 O09010 EC 2.4.1.222 Fringe

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF015768 AAB71668 O09010 EC 2.4.1.222
U94351 AAC53262 O09010 EC 2.4.1.222
BC115680 AAI15681 Q08EF2  
BC138600 AAI38601 B2RRW2  
BC138601 AAI38602 B2RRW2  
AK153283 BAE31866 O09010 EC 2.4.1.222

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lfng NP_032520 R.norvegicus Lfng 170905   NP_596884 97
H.sapiens LFNG 3955 Gene Info NP_001035257 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)