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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccl3, chemokine (C-C motif) ligand 3
Sequence ID:NM_011337
Entrez Gene ID:20302
Ensembl ID:ENSMUSG00000000982

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C|11 47.59 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 83648233 - 83649303

NM_011337 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
155158346134483461844
5166278346207083462181
6288048346270383462879

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40041119Full LengthBC111443chemokine (C-C motif) ligand 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035467  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011337 NP_035467 P10855
Q5QNW0
IL8

Related Sequences

 
mRNAGenPeptSwissProt
M23447 AAA40146 P10855
J04491 AAA40304 P10855
Q5QNW0
AF065939 AAC17506 P10855
Q5QNW0
AF065940 AAC17507 P10855
Q5QNW0
AF065941 AAC17508 P10855
Q5QNW0
AF065942 AAC17509 P10855
Q5QNW0
AF065943 AAC17510 P10855
Q5QNW0
BC111443 AAI11444 Q5QNW0
EU366956 ABY66390 Q5QNW0
AK150590 BAE29684 P10855
Q5QNW0
AK150634 BAE29723 P10855
Q5QNW0
AK150698 BAE29777 P10855
Q5QNW0
AK151581 BAE30521 P10855
Q5QNW0
AK152648 BAE31386 P10855
Q5QNW0
AK153155 BAE31765 Q3U6F9
X12531 CAA31047 P10855
Q5QNW0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccl3 NP_035467 R.norvegicus Ccl3 25542   NP_037157 89
H.sapiens CCL3L3 414062 Gene Info NP_001001437 76
H.sapiens CCL3L1 6349 Gene Info NP_066286 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta