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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bckdhb, branched chain ketoacid dehydrogenase E1, beta polypeptide
Sequence ID:NM_199195
Entrez Gene ID:12040
Ensembl ID:ENSMUSG00000032263

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 E2|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 83925151 - 84124239

 Exon Info From UCSC:
NM_199195

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1246285Full LengthBC064099branched chain ketoacid dehydrogenase E1, beta polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_954665  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_199195 NP_954665 Q6P3A8 EC 1.2.4.4 Transket_pyr
Transketolase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC064099 AAH64099 Q6P3A8 EC 1.2.4.4
AK164531 BAE37825 Q3TPB2  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bckdhb NP_954665 R.norvegicus Bckdhb 29711   NP_062140 100
H.sapiens BCKDHB 594 Gene Info NP_000047 97
A.thaliana BCDH BETA1 841998   NP_175947 69
A.thaliana DIN4 820547   NP_187954 69
A.gambiae AgaP_AGAP007531 1269704   XP_308350 68
D.melanogaster CG17691 3355069   NP_001015354 67
C.elegans tag-173 172539   NP_492149 67
P.falciparum PFE0225w 812914   XP_001351604 62
N.crassa NCU03913 3873737   XP_957552 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)