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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sag, retinal S-antigen
Sequence ID:NM_009118
Entrez Gene ID:20215
Ensembl ID:ENSMUSG00000056055

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 D|1 53.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 87803999 - 87834910

 Exon Info From UCSC:
NM_009118

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4527551Full LengthBC016498retinal S-antigen

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033144  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009118 NP_033144 P20443
Q3UPX6
Arrestin_N
Arrestin_C

Related Sequences

 
mRNAGenPeptSwissProt
M24086 AAA40090 P20443
Q3UPX6
BC016498 AAH16498 P20443
AY651760 AAV54097  
AK044214 BAC31820 Q8C8Y8
AK053278 BAC35331 Q8BPV0
AK143098 BAE25268 P20443
Q3UPX6
AK149299 BAE28798 Q3UEW3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sag NP_033144 R.norvegicus Sag 25539   NP_037155 97
H.sapiens SAG 6295 Gene Info NP_000532 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)