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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Fkbp4, FK506 binding protein 4
Sequence ID:NM_010219
Entrez Gene ID:14228
Ensembl ID:ENSMUSG00000030357

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 128430109 - 128432504

NM_010219 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1774128380124128380897
7751014128382439128382678
10151200128383123128383308
12011284128383543128383626
12851375128383720128383810
13761532128384322128384478
15331653128384769128384889
16541796128385731128385873
17971941128386587128386731
19422167128388423128388648

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2651490Full LengthBC003447FK506 binding protein 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034349  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_010219 NP_034349 P30416 EC 5.2.1.8 FKBP_C
TPR_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC003447 AAH03447 P30416 EC 5.2.1.8
AK035395 BAC29057 Q8CBS1  
AK083912 BAC39057 P30416 EC 5.2.1.8
AK160202 BAE35690 P30416 EC 5.2.1.8
X70887 CAA50231 P30416 EC 5.2.1.8
X17069 CAC39452 P30416 EC 5.2.1.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Fkbp4 NP_034349 R.norvegicus Fkbp4 260321   XP_342764 96
H.sapiens FKBP4 2288 Gene Info NP_002005 90
D.melanogaster FKBP59 47762   NP_524895 46
A.gambiae AgaP_AGAP009347 3291954   XP_559833 45
C.elegans fkb-6 180371   NP_508026 43
A.thaliana ROF2 834913   NP_199668 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)