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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rarg, retinoic acid receptor, gamma
Sequence ID:NM_001042727
NM_011244
Entrez Gene ID:19411
Ensembl ID:ENSMUSG00000001288

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E-F3|15 57.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 102234939 - 102257517

 Exon Info From UCSC:
NM_001042727
NM_011244

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3154037Full LengthBC012923retinoic acid receptor, gamma
3989967Full LengthBC013709retinoic acid receptor, gamma

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035374  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042727 NP_001036192    
NM_011244 NP_035374 P18911 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
M32068 AAA40032 P18911
M32069 AAA40033 P18911
M32070 AAA40034 P18911
M34476 AAA40035 P18911
M34475 AAA40036 P18911
BC012923 AAH12923 P18911
BC013709 AAH13709 P18911
M32072 AAO73787  
M32073 AAO73788  
AK148064 BAE28323 P18911
X15848 CAA33845 P18911

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rarg NP_035374 H.sapiens RARG 5916 Gene Info NP_000957 99
R.norvegicus Rarg 685072   NP_001128721 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta