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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Socs5, suppressor of cytokine signaling 5
Sequence ID:NM_019654
Entrez Gene ID:56468
Ensembl ID:ENSMUSG00000037104

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 E4|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 87133633 - 87135244

NM_019654 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13698750701887507386
3704308752008787520147
43143948753296187536924

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5702321Full LengthBC053015suppressor of cytokine signaling 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062628  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019654 NP_062628 O54928 SH2
SOCS_box

Related Sequences

 
mRNAGenPeptSwissProt
AF033187 AAB96648 O54928
BC053015 AAH53015 O54928
AK172997 BAD32275 Q6A021
AK135099 BAE22422 Q3UXZ1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Socs5 NP_062628 R.norvegicus Socs5 500616   NP_001102744 98
H.sapiens SOCS5 9655 Gene Info NP_054730 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)