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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Fam109a, family with sequence similarity 109, member A
Sequence ID:NM_175474
Entrez Gene ID:231717
Ensembl ID:ENSMUSG00000044134

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 121847666 - 121848844

NM_175474 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
197122299036122299132
98174122300478122300554
175286122301176122301287
2872335122302559122304607

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129604Full LengthBC120681family with sequence similarity 109, member A
40129606Full LengthBC120683family with sequence similarity 109, member A
2649239IncompleteBC095929RIKEN cDNA A230106M15 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780683  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175474 NP_780683 Q8BH49 PH

Related Sequences

 
mRNAGenPeptSwissProt
BC120681 AAI20682 Q8BH49
BC120683 AAI20684 Q8BH49
AK033618 BAC28394 Q8BH49
AK039192 BAC30272 Q8BH49

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Fam109a NP_780683 R.norvegicus RGD1310656 288664   XP_002728013 91
H.sapiens FAM109A 144717 Gene Info NP_001171467 75
A.gambiae AgaP_AGAP000864 1277378   XP_316835 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)