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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cetn3, Centrin 3
Sequence ID:NM_007684
Entrez Gene ID:12626
Ensembl ID:ENSMUSG00000021537

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13 C3|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 81783277 - 81797032

NM_007684 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1668192229081922355
672028192363981923774
2033178192584181925955
3185098193095481931145
51010138193565281936155

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3485864Full LengthBC002162centrin 3
30019209Full LengthBC054097centrin 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031710  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007684 NP_031710 O35648
Q545L8
efhand

Related Sequences

 
mRNAGenPeptSwissProt
BC002162 AAH02162 O35648
Q545L8
BC054097 AAH54097 O35648
Q545L8
AK004532 BAB23351 O35648
Q545L8
AK006289 BAB24508 O35648
Q545L8
AK006891 BAB24781 O35648
Q545L8
AK011821 BAB27862 Q9D046
AK017505 BAB30778 Q9CYN1
Y12474 CAA73078 O35648
Q545L8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cetn3 NP_031710 R.norvegicus Cetn3 170895   XP_342169 100
H.sapiens CETN3 1070 Gene Info NP_004356 99
P.falciparum PF10_0271 810428   XP_001347555 66
S.pombe cdc31 2539261   NP_587797 66
S.cerevisiae CDC31 854431   NP_014900 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)