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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ifnb1, interferon beta 1, fibroblast
Sequence ID:NM_010510
Entrez Gene ID:15977
Ensembl ID:ENSMUSG00000048806

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C4|4 42.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 88522179 - 88522794

NM_010510 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17708816792888168697

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8734144Full LengthBC119395interferon beta 1, fibroblast
8734146Full LengthBC119397interferon beta 1, fibroblast

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034640  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010510 NP_034640 P01575 Interferon

Related Sequences

 
mRNAGenPeptSwissProt
K00020 AAA37891 P01575
BC119395 AAI19396 Q0VE17
BC119397 AAI19398 Q0VE17

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifnb1 NP_034640 R.norvegicus Ifnb1 24481   NP_062000 77
H.sapiens IFNB1 3456 Gene Info NP_002167 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta