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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Csf3, colony stimulating factor 3 (granulocyte)
Sequence ID:NM_009971
Entrez Gene ID:12985
Ensembl ID:ENSMUSG00000038067

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11 57.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 98701343 - 98703631

NM_009971 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11079856262698562732
1082809856281798562989
2813889856333998563446
3895359856369398563839
53613639856411598564942

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129682Full LengthBC120759colony stimulating factor 3 (granulocyte)
40129684Full LengthBC120761colony stimulating factor 3 (granulocyte)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034101  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009971 NP_034101 P09920 IL6

Related Sequences

 
mRNAGenPeptSwissProt
M13926 AAA37672 P09920
BC120759 AAI20760 Q0VB73
BC120761 AAI20762 Q0VB73
AK145177 BAE26276 Q3UM22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Csf3 NP_034101 R.norvegicus Csf3 25610   NP_058800 86
H.sapiens CSF3 1440 Gene Info NP_000750 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta