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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gldn, gliomedin
Sequence ID:NM_177350
Entrez Gene ID:235379
Ensembl ID:ENSMUSG00000046167

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A5.3|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 54286829 - 54341786

NM_177350 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14015413429254134692
4024535416069854160749
4544715416823754168254
4725795416859454168701
5807265417968354179829
7278465418100954181128
8479305418221254182295
93110565418246254182587
105712075418356054183710
120846495418614254189583

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40058551Full LengthBC125025gliomedin
40058552Full LengthBC125026gliomedin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_796324  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177350 NP_796324 Q8BMF8 Collagen
OLF

Related Sequences

 
mRNAGenPeptSwissProt
BC125025 AAI25026 Q08AT9
BC125026 AAI25027 Q08AT9
AF548022 AAO49510 Q8BMF8
AK031523 BAC27432 Q8BMF8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gldn NP_796324 R.norvegicus Gldn 315675   NP_852047 94
H.sapiens GLDN 342035 Gene Info NP_861454 87
D.melanogaster CG6867 32782   NP_573262 36
A.gambiae AgaP_AGAP005849 1276518   XP_315876 35
C.elegans cof-2 183582   NP_491804 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)