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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Alox12, arachidonate 12-lipoxygenase
Sequence ID:NM_007440
Entrez Gene ID:11684
Ensembl ID:ENSMUSG00000000320

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B3|11 40.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 70242033 - 70255338

 Exon Info From UCSC:
NM_007440

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40141477Full LengthBC152329arachidonate 12-lipoxygenase
40141482Full LengthBC152403arachidonate 12-lipoxygenase
100066294Full LengthBC165994arachidonate 12-lipoxygenase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031466  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_007440 NP_031466 P39655 EC 1.13.11.31 Lipoxygenase
PLAT

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U04334 AAA20659 P39655 EC 1.13.11.31
S77511 AAB34667 P39655 EC 1.13.11.31
S80446 AAB36013 P39655 EC 1.13.11.31
BC152329 AAI52330 P39655
A2CF85
EC 1.13.11.31
BC152403 AAI52404 A2CF85  
BC165994 AAI65994    
AK036898 BAC29629 P39655 EC 1.13.11.31
AK079232 BAC37583 Q8C587  
AK087724 BAC39981 P39655 EC 1.13.11.31
AK172216 BAE42887 Q3T9Y3  
AK172488 BAE43031 Q3T9I9  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Alox12 NP_031466 R.norvegicus Alox12 287454   NP_001099268 95
H.sapiens ALOX12 239 Gene Info NP_000688 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)