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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nlgn3, neuroligin 3
Sequence ID:NM_172932
Entrez Gene ID:245537
Ensembl ID:ENSMUSG00000031302

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X D|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 101318209 - 101318645

NM_172932 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11169849451998494634
1177639849712398497769
7648239850241398502472
8249739850409598504244
97411599851047098510655
116019499851326798514056
195038799851475798516686

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9087684Full LengthBC150773neuroligin 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766520  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172932 NP_766520 Q8BYM5 COesterase

Related Sequences

 
mRNAGenPeptSwissProt
BC150773 AAI50774 B2RWZ9
AK039018 BAC30207 Q8BYM5
AK044438 BAC31918 Q8BYM5
AJ291730 CAC37694 Q924X0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nlgn3 NP_766520 R.norvegicus Nlgn3 171297   NP_599163 100
H.sapiens NLGN3 54413 Gene Info NP_851820 99
D.melanogaster CG34127 40912   NP_001036685 39
A.gambiae AgaP_AGAP003568 3290865   XP_562412 39
N.crassa NCU00761 3880298   XP_964158 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)