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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sfxn5, sideroflexin 5
Sequence ID:NM_178639
Entrez Gene ID:94282
Ensembl ID:ENSMUSG00000033720

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 D1|6 35.59 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 85267758 - 85333431

 Exon Info From UCSC:
NM_178639

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063877Full LengthBC160229sideroflexin 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848754  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178639 NP_848754 Q925N0 Mtc

Related Sequences

 
mRNAGenPeptSwissProt
BC160229 AAI60229  
AF325264 AAK39432 Q925N0
AK036285 BAC29372 Q925N0
AK043706 BAC31624 Q8BRQ9
AK082073 BAC38403 Q925N0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sfxn5 NP_848754 R.norvegicus Sfxn5 261737   NP_695210 99
H.sapiens SFXN5 94097 Gene Info NP_653180 98
C.elegans sfxn-5 174303   NP_001022022 50
S.pombe SPAC17G6.15c 2542199   NP_594262 43
S.cerevisiae FSF1 854445   NP_014914 41
N.crassa NCU00227 3873900   XP_957698 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)